February 2015 I will be in Granada for the 2015 Aquatic Sciences Meeting, giving a talk on the 26th on our metagenomics work

November 2014 I was the lead organizer for a software carpentry workshop at EMBL.

October 22 2014 O'Reilly webcast on Penalised Regression in Python

September 2014 Keynote talk in Python San Sebastien

September 2014 Speaking at TCMM2014

July 2014 Progression (in which I played the character Luis) has been released at New Filmmakers in NYC.

July 2014 Speaking at Lisbon Machine Learning School (LxMLS) 2014.

July 2014 New paper: Pena et al., Trypanosoma brucei histone H1 inhibits RNA polymerase I transcription and is important for parasite fitness in vivo in Molecular Microbiology [DOI].

June 2014 I will be teaching at a software carpentry workshop in Cyprus and Amman (Jordan).

April 2014 Traveling to University of Southern Denmark for a software carpentry bootcamp.

February 2014 I'm now a certified Software Carpentry instructor

January 2014 New publication: Kristoffer Forslund, Shinichi Sunagawa, Luis P. Coelho, Peer Bork, Metagenomic insights into the human gut resistome and the forces that shape it in Bioessays (2014). [DOI]

December 2013 New publication: Peter Liehl et al., Host-cell sensors for Plasmodium activate innate immunity against liver-stage infection in Nature Medicine 20, 47–53 (2014) [DOI]

November 2013 I attended the CFAR New York workshop

November 2013 I'm a member of the programme committee for DILS 2014 (10th International Conference on Data Integration in the Life Sciences)

October 2013 New publication: Shinichi Sunagawa et al., Metagenomic species profiling using universal phylogenetic marker genes in Nature Methods 10, 1196–1199 (2013) [Abstract] [DOI]

July 2013 I got a prize in the ICSB Computational Biology Wikipedia Competition for work on the Bioimage Informatics page

July 2013 My book Building Machine Learning Systems with Python is now published

July 2013 I posted a video abstract of my recent paper on subcellular location generalization

July 2013 I have a new paper out: Luis Pedro Coelho, Joshua D. Kangas, Armaghan Naik, Elvira Osuna-Highley, Estelle Glory-Afshar, Margaret Fuhrman, Ramanuja Simha, Peter B. Berget, Jonathan W. Jarvik, and Robert F. Murphy, Determining the subcellular location of new proteins from microscope images using local features in Bioinformatics, 2013 [Advanced Access]

May 2013 I started a research blog: metarabbit.wordpress.com

May 2013 My talk submission for BOSC (Bioinformatics Open Source Conference) about jug was accepted (it will be a lightning talk)

April 2013 I moved to EMBL, where I joined Peer Bork's group.

March 2013 I am part of the organizing committee for the 2013 edition of the Lisbon Machine Learning School

November 2012 I have a new manuscript up at the arXiv on my computer vision software, mahotas [Update in 2013: this is now a peer-reviewed journal paper]

September 2012 I am teaching two session of a Programming for Scientists Course at IMM.

May 2012 I am writing a book

January 2012 I am now based in Lisbon at IMM in Musa Mhlanga's lab.

November 2011 I start work as a postdoctoral researcher at Musa Mhlanga's lab.

October 2011 I graduated from Carnegie Mellon University with a PhD in computational biology!

September 2011 I was chosen as a 2012 Siebel Scholar